MIMIC Implementation Guide
1.3.0 - Draft
MIMIC Implementation Guide
1.3.0 - Draft
MIMIC Implementation Guide - Local Development build (v1.3.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
| Draft as of 2022-09-21 |
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<div xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><p>This code system <code>http://mimic.mit.edu/fhir/mimic/CodeSystem/mimic-microbiology-test</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">90212<a name="mimic-microbiology-test-90212"> </a></td><td>CLOSTRIDIUM DIFFICILE TOXIN A & B TEST</td></tr><tr><td style="white-space:nowrap">90054<a name="mimic-microbiology-test-90054"> </a></td><td>IMMUNOFLUORESCENT TEST FOR PNEUMOCYSTIS CARINII</td></tr><tr><td style="white-space:nowrap">90261<a name="mimic-microbiology-test-90261"> </a></td><td>ANAEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90135<a name="mimic-microbiology-test-90135"> </a></td><td>EPSTEIN-BARR VIRUS EBNA IgG AB</td></tr><tr><td style="white-space:nowrap">90241<a name="mimic-microbiology-test-90241"> </a></td><td>POTASSIUM HYDROXIDE PREPARATION</td></tr><tr><td style="white-space:nowrap">90137<a name="mimic-microbiology-test-90137"> </a></td><td>QUANTITATIVE RPR</td></tr><tr><td style="white-space:nowrap">90189<a name="mimic-microbiology-test-90189"> </a></td><td>MRSA SCREEN</td></tr><tr><td style="white-space:nowrap">90218<a name="mimic-microbiology-test-90218"> </a></td><td>Carbapenemase Resistant Enterobacteriaceae Screen</td></tr><tr><td style="white-space:nowrap">90042<a name="mimic-microbiology-test-90042"> </a></td><td>TREPONEMAL ANTIBODY TEST</td></tr><tr><td style="white-space:nowrap">90179<a name="mimic-microbiology-test-90179"> </a></td><td>POTASSIUM HYDROXIDE PREPARATION (HAIR/SKIN/NAILS)</td></tr><tr><td style="white-space:nowrap">90078<a name="mimic-microbiology-test-90078"> </a></td><td>CHROMOSOME ANALYSIS-FLUID</td></tr><tr><td style="white-space:nowrap">90106<a name="mimic-microbiology-test-90106"> </a></td><td>MICROSPORIDIA STAIN</td></tr><tr><td style="white-space:nowrap">90168<a name="mimic-microbiology-test-90168"> </a></td><td>DIRECT INFLUENZA B ANTIGEN TEST</td></tr><tr><td style="white-space:nowrap">90184<a name="mimic-microbiology-test-90184"> </a></td><td>STEM CELL - ANAEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90043<a name="mimic-microbiology-test-90043"> </a></td><td>POST MORTEM MYCOLOGY CULTURE</td></tr><tr><td style="white-space:nowrap">90066<a name="mimic-microbiology-test-90066"> </a></td><td>TISSUE CULTURE-LYMPHOCYTE</td></tr><tr><td style="white-space:nowrap">90232<a name="mimic-microbiology-test-90232"> </a></td><td>Staph aureus Preop PCR</td></tr><tr><td style="white-space:nowrap">90249<a name="mimic-microbiology-test-90249"> </a></td><td>CRYPTOCOCCAL ANTIGEN</td></tr><tr><td style="white-space:nowrap">90121<a name="mimic-microbiology-test-90121"> </a></td><td>CYCLOSPORA STAIN</td></tr><tr><td style="white-space:nowrap">90193<a name="mimic-microbiology-test-90193"> </a></td><td>voided</td></tr><tr><td style="white-space:nowrap">90192<a name="mimic-microbiology-test-90192"> </a></td><td>CMV Viral Load</td></tr><tr><td style="white-space:nowrap">90075<a name="mimic-microbiology-test-90075"> </a></td><td>CHROMOSOME ANALYSIS-BLOOD</td></tr><tr><td style="white-space:nowrap">90158<a name="mimic-microbiology-test-90158"> </a></td><td>R/O GC Only</td></tr><tr><td style="white-space:nowrap">90268<a name="mimic-microbiology-test-90268"> </a></td><td>FLUID CULTURE</td></tr><tr><td style="white-space:nowrap">90061<a name="mimic-microbiology-test-90061"> </a></td><td>BRUCELLA BLOOD CULTURE</td></tr><tr><td style="white-space:nowrap">90172<a name="mimic-microbiology-test-90172"> </a></td><td>HCV GENOTYPE</td></tr><tr><td style="white-space:nowrap">90170<a name="mimic-microbiology-test-90170"> </a></td><td>FISH ANALYSIS, 3-5 CELLS</td></tr><tr><td style="white-space:nowrap">90090<a name="mimic-microbiology-test-90090"> </a></td><td>POST-MORTEM VIRAL CULTURE</td></tr><tr><td style="white-space:nowrap">90185<a name="mimic-microbiology-test-90185"> </a></td><td>SMEAR FOR BACTERIAL VAGINOSIS</td></tr><tr><td style="white-space:nowrap">90210<a name="mimic-microbiology-test-90210"> </a></td><td>Malaria Antigen Test</td></tr><tr><td style="white-space:nowrap">90226<a name="mimic-microbiology-test-90226"> </a></td><td>RPR w/check for Prozone</td></tr><tr><td style="white-space:nowrap">90203<a name="mimic-microbiology-test-90203"> </a></td><td>Aerobic Bottle Gram Stain</td></tr><tr><td style="white-space:nowrap">90161<a name="mimic-microbiology-test-90161"> </a></td><td>TRICHOMONAS SALINE PREP</td></tr><tr><td style="white-space:nowrap">90254<a name="mimic-microbiology-test-90254"> </a></td><td>RUBELLA IgG SEROLOGY</td></tr><tr><td style="white-space:nowrap">90050<a name="mimic-microbiology-test-90050"> </a></td><td>GRAM STAIN- R/O THRUSH</td></tr><tr><td style="white-space:nowrap">90230<a name="mimic-microbiology-test-90230"> </a></td><td>Stool Hold Request</td></tr><tr><td style="white-space:nowrap">90116<a name="mimic-microbiology-test-90116"> </a></td><td>Chlamydia trachomatis, Nucleic Acid Probe, with Amplification</td></tr><tr><td style="white-space:nowrap">90065<a name="mimic-microbiology-test-90065"> </a></td><td>STOOL SMEAR FOR POLYMORPHONUCLEAR LEUKOCYTES</td></tr><tr><td style="white-space:nowrap">90272<a name="mimic-microbiology-test-90272"> </a></td><td>TISSUE</td></tr><tr><td style="white-space:nowrap">90093<a name="mimic-microbiology-test-90093"> </a></td><td>ANAEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90191<a name="mimic-microbiology-test-90191"> </a></td><td>MUMPS IgG ANTIBODY</td></tr><tr><td style="white-space:nowrap">90173<a name="mimic-microbiology-test-90173"> </a></td><td>Acid Fast Stain for Cryptosporidium</td></tr><tr><td style="white-space:nowrap">90148<a name="mimic-microbiology-test-90148"> </a></td><td>Cryopreservation - Cells</td></tr><tr><td style="white-space:nowrap">90202<a name="mimic-microbiology-test-90202"> </a></td><td>Blood Culture, Neonate</td></tr><tr><td style="white-space:nowrap">90269<a name="mimic-microbiology-test-90269"> </a></td><td>FUNGAL CULTURE</td></tr><tr><td style="white-space:nowrap">90095<a name="mimic-microbiology-test-90095"> </a></td><td>VARICELLA-ZOSTER CULTURE</td></tr><tr><td style="white-space:nowrap">90046<a name="mimic-microbiology-test-90046"> </a></td><td>WOUND CULTURE</td></tr><tr><td style="white-space:nowrap">90267<a name="mimic-microbiology-test-90267"> </a></td><td>FECAL CULTURE</td></tr><tr><td style="white-space:nowrap">90243<a name="mimic-microbiology-test-90243"> </a></td><td>CAMPYLOBACTER CULTURE</td></tr><tr><td style="white-space:nowrap">90136<a name="mimic-microbiology-test-90136"> </a></td><td>CMV IgM ANTIBODY</td></tr><tr><td style="white-space:nowrap">90055<a name="mimic-microbiology-test-90055"> </a></td><td>RESPIRATORY CULTURE</td></tr><tr><td style="white-space:nowrap">90215<a name="mimic-microbiology-test-90215"> </a></td><td>M. furfur Blood Culture</td></tr><tr><td style="white-space:nowrap">90265<a name="mimic-microbiology-test-90265"> </a></td><td>BLOOD/FUNGAL CULTURE</td></tr><tr><td style="white-space:nowrap">90071<a name="mimic-microbiology-test-90071"> </a></td><td>CHROMOSOME ANALYSIS-CVS</td></tr><tr><td style="white-space:nowrap">90163<a name="mimic-microbiology-test-90163"> </a></td><td>INTERPHASE FISH ANALYSIS, 25-99 CELLS</td></tr><tr><td style="white-space:nowrap">90270<a name="mimic-microbiology-test-90270"> </a></td><td>GRAM STAIN</td></tr><tr><td style="white-space:nowrap">90124<a name="mimic-microbiology-test-90124"> </a></td><td>CVS NEEDLE ASPIRATION EVALUATION</td></tr><tr><td style="white-space:nowrap">90164<a name="mimic-microbiology-test-90164"> </a></td><td>INTERPHASE FISH ANALYSIS, 100-300 CELLS</td></tr><tr><td style="white-space:nowrap">90186<a name="mimic-microbiology-test-90186"> </a></td><td>YEAST VAGINITIS CULTURE</td></tr><tr><td style="white-space:nowrap">90099<a name="mimic-microbiology-test-90099"> </a></td><td>NOCARDIA CULTURE</td></tr><tr><td style="white-space:nowrap">90264<a name="mimic-microbiology-test-90264"> </a></td><td>BLOOD/AFB CULTURE</td></tr><tr><td style="white-space:nowrap">90181<a name="mimic-microbiology-test-90181"> </a></td><td>O&P MACROSCOPIC EXAM - ARTHROPOD</td></tr><tr><td style="white-space:nowrap">90152<a name="mimic-microbiology-test-90152"> </a></td><td>Tissue Culture - Neoplastic Blood</td></tr><tr><td style="white-space:nowrap">90119<a name="mimic-microbiology-test-90119"> </a></td><td>HELICOBACTER PYLORI ANTIBODY TEST</td></tr><tr><td style="white-space:nowrap">90205<a name="mimic-microbiology-test-90205"> </a></td><td>Fluid Culture in Bottles</td></tr><tr><td style="white-space:nowrap">90074<a name="mimic-microbiology-test-90074"> </a></td><td>FOCUSED ANALYSIS</td></tr><tr><td style="white-space:nowrap">90209<a name="mimic-microbiology-test-90209"> </a></td><td>Pediatric Bottle Gram Stain</td></tr><tr><td style="white-space:nowrap">90206<a name="mimic-microbiology-test-90206"> </a></td><td>Blood Culture, Post Mortem</td></tr><tr><td style="white-space:nowrap">90115<a name="mimic-microbiology-test-90115"> </a></td><td>R/O VANCOMYCIN RESISTANT ENTEROCOCCUS</td></tr><tr><td style="white-space:nowrap">90091<a name="mimic-microbiology-test-90091"> </a></td><td>VARICELLA-ZOSTER IgG SEROLOGY</td></tr><tr><td style="white-space:nowrap">90224<a name="mimic-microbiology-test-90224"> </a></td><td>Cipro Resistant Screen</td></tr><tr><td style="white-space:nowrap">90109<a name="mimic-microbiology-test-90109"> </a></td><td>M.FURFUR CULTURE</td></tr><tr><td style="white-space:nowrap">90072<a name="mimic-microbiology-test-90072"> </a></td><td>CHROMOSOME ANALYSIS-TISSUE</td></tr><tr><td style="white-space:nowrap">90260<a name="mimic-microbiology-test-90260"> </a></td><td>AEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90236<a name="mimic-microbiology-test-90236"> </a></td><td>Anaerobic culture, Prosthetic Joint Fluid</td></tr><tr><td style="white-space:nowrap">90201<a name="mimic-microbiology-test-90201"> </a></td><td>Blood Culture, Routine</td></tr><tr><td style="white-space:nowrap">90233<a name="mimic-microbiology-test-90233"> </a></td><td>C. difficile Toxin antigen assay</td></tr><tr><td style="white-space:nowrap">90182<a name="mimic-microbiology-test-90182"> </a></td><td>STEM CELL - AEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90222<a name="mimic-microbiology-test-90222"> </a></td><td>MTB Direct Amplification</td></tr><tr><td style="white-space:nowrap">90130<a name="mimic-microbiology-test-90130"> </a></td><td>R/O Beta Strep Group A</td></tr><tr><td style="white-space:nowrap">90128<a name="mimic-microbiology-test-90128"> </a></td><td>Legionella Urinary Antigen </td></tr><tr><td style="white-space:nowrap">90174<a name="mimic-microbiology-test-90174"> </a></td><td>Concentration and Stain for Giardia</td></tr><tr><td style="white-space:nowrap">90214<a name="mimic-microbiology-test-90214"> </a></td><td>Respiratory Viral Culture</td></tr><tr><td style="white-space:nowrap">90140<a name="mimic-microbiology-test-90140"> </a></td><td>QUANTITATIVE CRYPTOCOCCAL ANTIGEN</td></tr><tr><td style="white-space:nowrap">90096<a name="mimic-microbiology-test-90096"> </a></td><td>DIRECT ANTIGEN TEST FOR VARICELLA-ZOSTER VIRUS</td></tr><tr><td style="white-space:nowrap">90039<a name="mimic-microbiology-test-90039"> </a></td><td>URINE CULTURE</td></tr><tr><td style="white-space:nowrap">90144<a name="mimic-microbiology-test-90144"> </a></td><td>TOXOPLASMA IgG ANTIBODY</td></tr><tr><td style="white-space:nowrap">90207<a name="mimic-microbiology-test-90207"> </a></td><td>Stem Cell Aer/Ana Culture</td></tr><tr><td style="white-space:nowrap">90086<a name="mimic-microbiology-test-90086"> </a></td><td>FECAL CULTURE - R/O YERSINIA</td></tr><tr><td style="white-space:nowrap">90190<a name="mimic-microbiology-test-90190"> </a></td><td>Tissue culture for additional cells</td></tr><tr><td style="white-space:nowrap">90068<a name="mimic-microbiology-test-90068"> </a></td><td>TISSUE CULTURE-FLUID</td></tr><tr><td style="white-space:nowrap">90225<a name="mimic-microbiology-test-90225"> </a></td><td>ED Gram Stain for Yeast</td></tr><tr><td style="white-space:nowrap">90255<a name="mimic-microbiology-test-90255"> </a></td><td>VIRAL CULTURE: R/O CYTOMEGALOVIRUS</td></tr><tr><td style="white-space:nowrap">90157<a name="mimic-microbiology-test-90157"> </a></td><td>DIRECT RSV ANTIGEN TEST</td></tr><tr><td style="white-space:nowrap">90079<a name="mimic-microbiology-test-90079"> </a></td><td>TISSUE CULTURE-CVS</td></tr><tr><td style="white-space:nowrap">90049<a name="mimic-microbiology-test-90049"> </a></td><td>BRUCELLA CULTURE</td></tr><tr><td style="white-space:nowrap">90259<a name="mimic-microbiology-test-90259"> </a></td><td>SCOTCH TAPE PREP/PADDLE</td></tr><tr><td style="white-space:nowrap">90150<a name="mimic-microbiology-test-90150"> </a></td><td>MOLECULAR CYTOGENETICS - DNA PROBE</td></tr><tr><td style="white-space:nowrap">90219<a name="mimic-microbiology-test-90219"> </a></td><td>CRE/ESBL/AMP-C Screening</td></tr><tr><td style="white-space:nowrap">90104<a name="mimic-microbiology-test-90104"> </a></td><td>Direct Antigen Test for Herpes Simplex Virus Types 1 & 2</td></tr><tr><td style="white-space:nowrap">90238<a name="mimic-microbiology-test-90238"> </a></td><td>POST-MORTEM ACID-FAST CULTURE</td></tr><tr><td style="white-space:nowrap">90160<a name="mimic-microbiology-test-90160"> </a></td><td>Cryptosporidium/Giardia (DFA)</td></tr><tr><td style="white-space:nowrap">90194<a name="mimic-microbiology-test-90194"> </a></td><td>R/O Group B Strep - Penicillin Allergy</td></tr><tr><td style="white-space:nowrap">90053<a name="mimic-microbiology-test-90053"> </a></td><td>CYTOMEGALOVIRUS EARLY ANTIGEN TEST (SHELL VIAL METHOD)</td></tr><tr><td style="white-space:nowrap">90195<a name="mimic-microbiology-test-90195"> </a></td><td>Reflex HCV Qual PCR</td></tr><tr><td style="white-space:nowrap">90220<a name="mimic-microbiology-test-90220"> </a></td><td>Deparaffinization, Lysis of Cells</td></tr><tr><td style="white-space:nowrap">90131<a name="mimic-microbiology-test-90131"> </a></td><td>ASO TITER</td></tr><tr><td style="white-space:nowrap">90105<a name="mimic-microbiology-test-90105"> </a></td><td>Respiratory Viral Antigen Screen</td></tr><tr><td style="white-space:nowrap">90235<a name="mimic-microbiology-test-90235"> </a></td><td>REFLEX URINE CULTURE</td></tr><tr><td style="white-space:nowrap">90154<a name="mimic-microbiology-test-90154"> </a></td><td>BARTONELLA BLOOD CULTURE</td></tr><tr><td style="white-space:nowrap">90083<a name="mimic-microbiology-test-90083"> </a></td><td>FECAL CULTURE - R/O VIBRIO</td></tr><tr><td style="white-space:nowrap">90169<a name="mimic-microbiology-test-90169"> </a></td><td>GEN-PROBE AMPLIFIED M. TUBERCULOSIS DIRECT TEST (MTD)</td></tr><tr><td style="white-space:nowrap">90175<a name="mimic-microbiology-test-90175"> </a></td><td>HIV-1 Viral Load/Ultrasensitive</td></tr><tr><td style="white-space:nowrap">90087<a name="mimic-microbiology-test-90087"> </a></td><td>FECAL CULTURE - R/O E.COLI 0157:H7</td></tr><tr><td style="white-space:nowrap">90171<a name="mimic-microbiology-test-90171"> </a></td><td>FISH ANALYSIS, 10-30 CELLS</td></tr><tr><td style="white-space:nowrap">90245<a name="mimic-microbiology-test-90245"> </a></td><td>ANAEROBIC CULTURE</td></tr><tr><td style="white-space:nowrap">90097<a name="mimic-microbiology-test-90097"> </a></td><td>R/O GROUP B BETA STREP</td></tr><tr><td style="white-space:nowrap">90200<a name="mimic-microbiology-test-90200"> </a></td><td>STAT OR Gram Stain</td></tr><tr><td style="white-space:nowrap">90067<a name="mimic-microbiology-test-90067"> </a></td><td>TISSUE CULTURE-AMNIOTIC FLUID</td></tr><tr><td style="white-space:nowrap">90252<a name="mimic-microbiology-test-90252"> </a></td><td>VIRAL CULTURE</td></tr><tr><td style="white-space:nowrap">90076<a name="mimic-microbiology-test-90076"> </a></td><td>CHROMOSOME ANALYSIS-AMNIOTIC FLUID</td></tr><tr><td style="white-space:nowrap">90155<a name="mimic-microbiology-test-90155"> </a></td><td>MOLECULAR CYTOGENETICS-DNA Probe</td></tr><tr><td style="white-space:nowrap">90134<a name="mimic-microbiology-test-90134"> </a></td><td>EPSTEIN-BARR VIRUS VCA-IgM AB</td></tr><tr><td style="white-space:nowrap">90256<a name="mimic-microbiology-test-90256"> </a></td><td>VIRAL CULTURE: R/O HERPES SIMPLEX VIRUS</td></tr><tr><td style="white-space:nowrap">90221<a name="mimic-microbiology-test-90221"> </a></td><td>C. difficile PCR</td></tr><tr><td style="white-space:nowrap">90162<a name="mimic-microbiology-test-90162"> </a></td><td>ADDITIONAL CELLS COUNTED</td></tr><tr><td style="white-space:nowrap">90038<a name="mimic-microbiology-test-90038"> </a></td><td>GENITAL CULTURE</td></tr><tr><td style="white-space:nowrap">90198<a name="mimic-microbiology-test-90198"> </a></td><td>Staph aureus Screen</td></tr><tr><td style="white-space:nowrap">90216<a name="mimic-microbiology-test-90216"> </a></td><td>Malassezia furfur Culture</td></tr><tr><td style="white-space:nowrap">90159<a name="mimic-microbiology-test-90159"> </a></td><td>POSTMORTEM CULTURE</td></tr><tr><td style="white-space:nowrap">90107<a name="mimic-microbiology-test-90107"> </a></td><td>Respiratory Virus Identification</td></tr><tr><td style="white-space:nowrap">90117<a name="mimic-microbiology-test-90117"> </a></td><td>ANAEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90101<a name="mimic-microbiology-test-90101"> </a></td><td>EPSTEIN-BARR VIRUS VCA-IgG AB</td></tr><tr><td style="white-space:nowrap">90227<a name="mimic-microbiology-test-90227"> </a></td><td>Sonication culture, prosthetic joint</td></tr><tr><td style="white-space:nowrap">90080<a name="mimic-microbiology-test-90080"> </a></td><td>TISSUE CULTURE-TISSUE</td></tr><tr><td style="white-space:nowrap">90229<a name="mimic-microbiology-test-90229"> </a></td><td>Lyme IgM</td></tr><tr><td style="white-space:nowrap">90211<a name="mimic-microbiology-test-90211"> </a></td><td>Rubella IgG/IgM Antibody</td></tr><tr><td style="white-space:nowrap">90123<a name="mimic-microbiology-test-90123"> </a></td><td>HCV VIRAL LOAD</td></tr><tr><td style="white-space:nowrap">90258<a name="mimic-microbiology-test-90258"> </a></td><td>AEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90143<a name="mimic-microbiology-test-90143"> </a></td><td>CMV IgG ANTIBODY</td></tr><tr><td style="white-space:nowrap">90250<a name="mimic-microbiology-test-90250"> </a></td><td>OVA + PARASITES</td></tr><tr><td style="white-space:nowrap">90239<a name="mimic-microbiology-test-90239"> </a></td><td>POST-MORTEM DIRECT ACID-FAST STAIN</td></tr><tr><td style="white-space:nowrap">90098<a name="mimic-microbiology-test-90098"> </a></td><td>SWAB- R/O YEAST</td></tr><tr><td style="white-space:nowrap">90178<a name="mimic-microbiology-test-90178"> </a></td><td>FUNGAL CULTURE (HAIR/SKIN/NAILS)</td></tr><tr><td style="white-space:nowrap">90246<a name="mimic-microbiology-test-90246"> </a></td><td>ACID FAST SMEAR</td></tr><tr><td style="white-space:nowrap">90142<a name="mimic-microbiology-test-90142"> </a></td><td>VIRAL CULTURE: R/O CYTOMEGALOVIRUS</td></tr><tr><td style="white-space:nowrap">90253<a name="mimic-microbiology-test-90253"> </a></td><td>CLOSTRIDIUM DIFFICILE TOXIN ASSAY</td></tr><tr><td style="white-space:nowrap">90208<a name="mimic-microbiology-test-90208"> </a></td><td>Myco-F Bottle Gram Stain</td></tr><tr><td style="white-space:nowrap">90153<a name="mimic-microbiology-test-90153"> </a></td><td>Additional Cells and Karyotype</td></tr><tr><td style="white-space:nowrap">90151<a name="mimic-microbiology-test-90151"> </a></td><td>Tissue Culture-Bone Marrow</td></tr><tr><td style="white-space:nowrap">90204<a name="mimic-microbiology-test-90204"> </a></td><td>Anaerobic Bottle Gram Stain</td></tr><tr><td style="white-space:nowrap">90111<a name="mimic-microbiology-test-90111"> </a></td><td>CHROMOSOME ANALYSIS-BONE MARROW</td></tr><tr><td style="white-space:nowrap">90133<a name="mimic-microbiology-test-90133"> </a></td><td>MONOSPOT</td></tr><tr><td style="white-space:nowrap">90188<a name="mimic-microbiology-test-90188"> </a></td><td>NEISSERIA GONORRHOEAE (GC), NUCLEIC ACID PROBE, WITH AMPLIFICATION</td></tr><tr><td style="white-space:nowrap">90177<a name="mimic-microbiology-test-90177"> </a></td><td>HBV Viral Load</td></tr><tr><td style="white-space:nowrap">90156<a name="mimic-microbiology-test-90156"> </a></td><td>DIRECT INFLUENZA A ANTIGEN TEST</td></tr><tr><td style="white-space:nowrap">90112<a name="mimic-microbiology-test-90112"> </a></td><td>MODIFIED ACID-FAST STAIN FOR NOCARDIA</td></tr><tr><td style="white-space:nowrap">90213<a name="mimic-microbiology-test-90213"> </a></td><td>Enterovirus Culture</td></tr><tr><td style="white-space:nowrap">90231<a name="mimic-microbiology-test-90231"> </a></td><td>Swab - R/O Yeast - IC</td></tr><tr><td style="white-space:nowrap">90167<a name="mimic-microbiology-test-90167"> </a></td><td>ISOLATE FOR MIC</td></tr><tr><td style="white-space:nowrap">90129<a name="mimic-microbiology-test-90129"> </a></td><td>ASO Screen</td></tr><tr><td style="white-space:nowrap">90059<a name="mimic-microbiology-test-90059"> </a></td><td>LEGIONELLA CULTURE</td></tr><tr><td style="white-space:nowrap">90228<a name="mimic-microbiology-test-90228"> </a></td><td>Lyme IgG</td></tr><tr><td style="white-space:nowrap">90113<a name="mimic-microbiology-test-90113"> </a></td><td>URINE-GRAM STAIN - UNSPUN</td></tr><tr><td style="white-space:nowrap">90240<a name="mimic-microbiology-test-90240"> </a></td><td>ACID FAST CULTURE</td></tr><tr><td style="white-space:nowrap">90248<a name="mimic-microbiology-test-90248"> </a></td><td>RAPID PLASMA REAGIN TEST</td></tr><tr><td style="white-space:nowrap">90126<a name="mimic-microbiology-test-90126"> </a></td><td>TOXOPLASMA IgM ANTIBODY</td></tr><tr><td style="white-space:nowrap">90088<a name="mimic-microbiology-test-90088"> </a></td><td>CHROMOSOME ANALYSIS - ADDITIONAL KARYOTYPE</td></tr><tr><td style="white-space:nowrap">90166<a name="mimic-microbiology-test-90166"> </a></td><td>Problem</td></tr><tr><td style="white-space:nowrap">90187<a name="mimic-microbiology-test-90187"> </a></td><td>GENITAL CULTURE FOR TOXIC SHOCK</td></tr><tr><td style="white-space:nowrap">90199<a name="mimic-microbiology-test-90199"> </a></td><td>Immunofluorescent test for Pneumocystis jirovecii (carinii)</td></tr><tr><td style="white-space:nowrap">90127<a name="mimic-microbiology-test-90127"> </a></td><td>RUBEOLA ANTIBODY, IgG</td></tr><tr><td style="white-space:nowrap">90180<a name="mimic-microbiology-test-90180"> </a></td><td>O&P MACROSCOPIC EXAM - WORM</td></tr><tr><td style="white-space:nowrap">90262<a name="mimic-microbiology-test-90262"> </a></td><td>CHLAMYDIA CULTURE</td></tr><tr><td style="white-space:nowrap">90092<a name="mimic-microbiology-test-90092"> </a></td><td>AEROBIC BOTTLE</td></tr><tr><td style="white-space:nowrap">90146<a name="mimic-microbiology-test-90146"> </a></td><td>CHROMOSOME ANALYSIS-NEOPLASTIC BLOOD</td></tr><tr><td style="white-space:nowrap">90132<a name="mimic-microbiology-test-90132"> </a></td><td>LYME SEROLOGY</td></tr></table></div>
</text>
<url
value="http://mimic.mit.edu/fhir/mimic/CodeSystem/mimic-microbiology-test"/>
<version value="1.3.0"/>
<name value="MimicMicrobiologyTest"/>
<title value="MimicMicrobiologyTest"/>
<status value="draft"/>
<date value="2022-09-21T13:59:43-04:00"/>
<publisher value="KinD Lab"/>
<contact>
<name value="KinD Lab"/>
<telecom>
<system value="url"/>
<value value="http://fhir.kindlab.sickkids.ca"/>
</telecom>
</contact>
<description value="The microbiology test completed in MIMIC"/>
<valueSet
value="http://mimic.mit.edu/fhir/mimic/ValueSet/mimic-microbiology-test"/>
<content value="complete"/>
<concept>
<code value="90212"/>
<display value="CLOSTRIDIUM DIFFICILE TOXIN A & B TEST"/>
</concept>
<concept>
<code value="90054"/>
<display value="IMMUNOFLUORESCENT TEST FOR PNEUMOCYSTIS CARINII"/>
</concept>
<concept>
<code value="90261"/>
<display value="ANAEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90135"/>
<display value="EPSTEIN-BARR VIRUS EBNA IgG AB"/>
</concept>
<concept>
<code value="90241"/>
<display value="POTASSIUM HYDROXIDE PREPARATION"/>
</concept>
<concept>
<code value="90137"/>
<display value="QUANTITATIVE RPR"/>
</concept>
<concept>
<code value="90189"/>
<display value="MRSA SCREEN"/>
</concept>
<concept>
<code value="90218"/>
<display value="Carbapenemase Resistant Enterobacteriaceae Screen"/>
</concept>
<concept>
<code value="90042"/>
<display value="TREPONEMAL ANTIBODY TEST"/>
</concept>
<concept>
<code value="90179"/>
<display value="POTASSIUM HYDROXIDE PREPARATION (HAIR/SKIN/NAILS)"/>
</concept>
<concept>
<code value="90078"/>
<display value="CHROMOSOME ANALYSIS-FLUID"/>
</concept>
<concept>
<code value="90106"/>
<display value="MICROSPORIDIA STAIN"/>
</concept>
<concept>
<code value="90168"/>
<display value="DIRECT INFLUENZA B ANTIGEN TEST"/>
</concept>
<concept>
<code value="90184"/>
<display value="STEM CELL - ANAEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90043"/>
<display value="POST MORTEM MYCOLOGY CULTURE"/>
</concept>
<concept>
<code value="90066"/>
<display value="TISSUE CULTURE-LYMPHOCYTE"/>
</concept>
<concept>
<code value="90232"/>
<display value="Staph aureus Preop PCR"/>
</concept>
<concept>
<code value="90249"/>
<display value="CRYPTOCOCCAL ANTIGEN"/>
</concept>
<concept>
<code value="90121"/>
<display value="CYCLOSPORA STAIN"/>
</concept>
<concept>
<code value="90193"/>
<display value="voided"/>
</concept>
<concept>
<code value="90192"/>
<display value="CMV Viral Load"/>
</concept>
<concept>
<code value="90075"/>
<display value="CHROMOSOME ANALYSIS-BLOOD"/>
</concept>
<concept>
<code value="90158"/>
<display value="R/O GC Only"/>
</concept>
<concept>
<code value="90268"/>
<display value="FLUID CULTURE"/>
</concept>
<concept>
<code value="90061"/>
<display value="BRUCELLA BLOOD CULTURE"/>
</concept>
<concept>
<code value="90172"/>
<display value="HCV GENOTYPE"/>
</concept>
<concept>
<code value="90170"/>
<display value="FISH ANALYSIS, 3-5 CELLS"/>
</concept>
<concept>
<code value="90090"/>
<display value="POST-MORTEM VIRAL CULTURE"/>
</concept>
<concept>
<code value="90185"/>
<display value="SMEAR FOR BACTERIAL VAGINOSIS"/>
</concept>
<concept>
<code value="90210"/>
<display value="Malaria Antigen Test"/>
</concept>
<concept>
<code value="90226"/>
<display value="RPR w/check for Prozone"/>
</concept>
<concept>
<code value="90203"/>
<display value="Aerobic Bottle Gram Stain"/>
</concept>
<concept>
<code value="90161"/>
<display value="TRICHOMONAS SALINE PREP"/>
</concept>
<concept>
<code value="90254"/>
<display value="RUBELLA IgG SEROLOGY"/>
</concept>
<concept>
<code value="90050"/>
<display value="GRAM STAIN- R/O THRUSH"/>
</concept>
<concept>
<code value="90230"/>
<display value="Stool Hold Request"/>
</concept>
<concept>
<code value="90116"/>
<display
value="Chlamydia trachomatis, Nucleic Acid Probe, with Amplification"/>
</concept>
<concept>
<code value="90065"/>
<display value="STOOL SMEAR FOR POLYMORPHONUCLEAR LEUKOCYTES"/>
</concept>
<concept>
<code value="90272"/>
<display value="TISSUE"/>
</concept>
<concept>
<code value="90093"/>
<display value="ANAEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90191"/>
<display value="MUMPS IgG ANTIBODY"/>
</concept>
<concept>
<code value="90173"/>
<display value="Acid Fast Stain for Cryptosporidium"/>
</concept>
<concept>
<code value="90148"/>
<display value="Cryopreservation - Cells"/>
</concept>
<concept>
<code value="90202"/>
<display value="Blood Culture, Neonate"/>
</concept>
<concept>
<code value="90269"/>
<display value="FUNGAL CULTURE"/>
</concept>
<concept>
<code value="90095"/>
<display value="VARICELLA-ZOSTER CULTURE"/>
</concept>
<concept>
<code value="90046"/>
<display value="WOUND CULTURE"/>
</concept>
<concept>
<code value="90267"/>
<display value="FECAL CULTURE"/>
</concept>
<concept>
<code value="90243"/>
<display value="CAMPYLOBACTER CULTURE"/>
</concept>
<concept>
<code value="90136"/>
<display value="CMV IgM ANTIBODY"/>
</concept>
<concept>
<code value="90055"/>
<display value="RESPIRATORY CULTURE"/>
</concept>
<concept>
<code value="90215"/>
<display value="M. furfur Blood Culture"/>
</concept>
<concept>
<code value="90265"/>
<display value="BLOOD/FUNGAL CULTURE"/>
</concept>
<concept>
<code value="90071"/>
<display value="CHROMOSOME ANALYSIS-CVS"/>
</concept>
<concept>
<code value="90163"/>
<display value="INTERPHASE FISH ANALYSIS, 25-99 CELLS"/>
</concept>
<concept>
<code value="90270"/>
<display value="GRAM STAIN"/>
</concept>
<concept>
<code value="90124"/>
<display value="CVS NEEDLE ASPIRATION EVALUATION"/>
</concept>
<concept>
<code value="90164"/>
<display value="INTERPHASE FISH ANALYSIS, 100-300 CELLS"/>
</concept>
<concept>
<code value="90186"/>
<display value="YEAST VAGINITIS CULTURE"/>
</concept>
<concept>
<code value="90099"/>
<display value="NOCARDIA CULTURE"/>
</concept>
<concept>
<code value="90264"/>
<display value="BLOOD/AFB CULTURE"/>
</concept>
<concept>
<code value="90181"/>
<display value="O&P MACROSCOPIC EXAM - ARTHROPOD"/>
</concept>
<concept>
<code value="90152"/>
<display value="Tissue Culture - Neoplastic Blood"/>
</concept>
<concept>
<code value="90119"/>
<display value="HELICOBACTER PYLORI ANTIBODY TEST"/>
</concept>
<concept>
<code value="90205"/>
<display value="Fluid Culture in Bottles"/>
</concept>
<concept>
<code value="90074"/>
<display value="FOCUSED ANALYSIS"/>
</concept>
<concept>
<code value="90209"/>
<display value="Pediatric Bottle Gram Stain"/>
</concept>
<concept>
<code value="90206"/>
<display value="Blood Culture, Post Mortem"/>
</concept>
<concept>
<code value="90115"/>
<display value="R/O VANCOMYCIN RESISTANT ENTEROCOCCUS"/>
</concept>
<concept>
<code value="90091"/>
<display value="VARICELLA-ZOSTER IgG SEROLOGY"/>
</concept>
<concept>
<code value="90224"/>
<display value="Cipro Resistant Screen"/>
</concept>
<concept>
<code value="90109"/>
<display value="M.FURFUR CULTURE"/>
</concept>
<concept>
<code value="90072"/>
<display value="CHROMOSOME ANALYSIS-TISSUE"/>
</concept>
<concept>
<code value="90260"/>
<display value="AEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90236"/>
<display value="Anaerobic culture, Prosthetic Joint Fluid"/>
</concept>
<concept>
<code value="90201"/>
<display value="Blood Culture, Routine"/>
</concept>
<concept>
<code value="90233"/>
<display value="C. difficile Toxin antigen assay"/>
</concept>
<concept>
<code value="90182"/>
<display value="STEM CELL - AEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90222"/>
<display value="MTB Direct Amplification"/>
</concept>
<concept>
<code value="90130"/>
<display value="R/O Beta Strep Group A"/>
</concept>
<concept>
<code value="90128"/>
<display value="Legionella Urinary Antigen "/>
</concept>
<concept>
<code value="90174"/>
<display value="Concentration and Stain for Giardia"/>
</concept>
<concept>
<code value="90214"/>
<display value="Respiratory Viral Culture"/>
</concept>
<concept>
<code value="90140"/>
<display value="QUANTITATIVE CRYPTOCOCCAL ANTIGEN"/>
</concept>
<concept>
<code value="90096"/>
<display value="DIRECT ANTIGEN TEST FOR VARICELLA-ZOSTER VIRUS"/>
</concept>
<concept>
<code value="90039"/>
<display value="URINE CULTURE"/>
</concept>
<concept>
<code value="90144"/>
<display value="TOXOPLASMA IgG ANTIBODY"/>
</concept>
<concept>
<code value="90207"/>
<display value="Stem Cell Aer/Ana Culture"/>
</concept>
<concept>
<code value="90086"/>
<display value="FECAL CULTURE - R/O YERSINIA"/>
</concept>
<concept>
<code value="90190"/>
<display value="Tissue culture for additional cells"/>
</concept>
<concept>
<code value="90068"/>
<display value="TISSUE CULTURE-FLUID"/>
</concept>
<concept>
<code value="90225"/>
<display value="ED Gram Stain for Yeast"/>
</concept>
<concept>
<code value="90255"/>
<display value="VIRAL CULTURE: R/O CYTOMEGALOVIRUS"/>
</concept>
<concept>
<code value="90157"/>
<display value="DIRECT RSV ANTIGEN TEST"/>
</concept>
<concept>
<code value="90079"/>
<display value="TISSUE CULTURE-CVS"/>
</concept>
<concept>
<code value="90049"/>
<display value="BRUCELLA CULTURE"/>
</concept>
<concept>
<code value="90259"/>
<display value="SCOTCH TAPE PREP/PADDLE"/>
</concept>
<concept>
<code value="90150"/>
<display value="MOLECULAR CYTOGENETICS - DNA PROBE"/>
</concept>
<concept>
<code value="90219"/>
<display value="CRE/ESBL/AMP-C Screening"/>
</concept>
<concept>
<code value="90104"/>
<display
value="Direct Antigen Test for Herpes Simplex Virus Types 1 & 2"/>
</concept>
<concept>
<code value="90238"/>
<display value="POST-MORTEM ACID-FAST CULTURE"/>
</concept>
<concept>
<code value="90160"/>
<display value="Cryptosporidium/Giardia (DFA)"/>
</concept>
<concept>
<code value="90194"/>
<display value="R/O Group B Strep - Penicillin Allergy"/>
</concept>
<concept>
<code value="90053"/>
<display value="CYTOMEGALOVIRUS EARLY ANTIGEN TEST (SHELL VIAL METHOD)"/>
</concept>
<concept>
<code value="90195"/>
<display value="Reflex HCV Qual PCR"/>
</concept>
<concept>
<code value="90220"/>
<display value="Deparaffinization, Lysis of Cells"/>
</concept>
<concept>
<code value="90131"/>
<display value="ASO TITER"/>
</concept>
<concept>
<code value="90105"/>
<display value="Respiratory Viral Antigen Screen"/>
</concept>
<concept>
<code value="90235"/>
<display value="REFLEX URINE CULTURE"/>
</concept>
<concept>
<code value="90154"/>
<display value="BARTONELLA BLOOD CULTURE"/>
</concept>
<concept>
<code value="90083"/>
<display value="FECAL CULTURE - R/O VIBRIO"/>
</concept>
<concept>
<code value="90169"/>
<display value="GEN-PROBE AMPLIFIED M. TUBERCULOSIS DIRECT TEST (MTD)"/>
</concept>
<concept>
<code value="90175"/>
<display value="HIV-1 Viral Load/Ultrasensitive"/>
</concept>
<concept>
<code value="90087"/>
<display value="FECAL CULTURE - R/O E.COLI 0157:H7"/>
</concept>
<concept>
<code value="90171"/>
<display value="FISH ANALYSIS, 10-30 CELLS"/>
</concept>
<concept>
<code value="90245"/>
<display value="ANAEROBIC CULTURE"/>
</concept>
<concept>
<code value="90097"/>
<display value="R/O GROUP B BETA STREP"/>
</concept>
<concept>
<code value="90200"/>
<display value="STAT OR Gram Stain"/>
</concept>
<concept>
<code value="90067"/>
<display value="TISSUE CULTURE-AMNIOTIC FLUID"/>
</concept>
<concept>
<code value="90252"/>
<display value="VIRAL CULTURE"/>
</concept>
<concept>
<code value="90076"/>
<display value="CHROMOSOME ANALYSIS-AMNIOTIC FLUID"/>
</concept>
<concept>
<code value="90155"/>
<display value="MOLECULAR CYTOGENETICS-DNA Probe"/>
</concept>
<concept>
<code value="90134"/>
<display value="EPSTEIN-BARR VIRUS VCA-IgM AB"/>
</concept>
<concept>
<code value="90256"/>
<display value="VIRAL CULTURE: R/O HERPES SIMPLEX VIRUS"/>
</concept>
<concept>
<code value="90221"/>
<display value="C. difficile PCR"/>
</concept>
<concept>
<code value="90162"/>
<display value="ADDITIONAL CELLS COUNTED"/>
</concept>
<concept>
<code value="90038"/>
<display value="GENITAL CULTURE"/>
</concept>
<concept>
<code value="90198"/>
<display value="Staph aureus Screen"/>
</concept>
<concept>
<code value="90216"/>
<display value="Malassezia furfur Culture"/>
</concept>
<concept>
<code value="90159"/>
<display value="POSTMORTEM CULTURE"/>
</concept>
<concept>
<code value="90107"/>
<display value="Respiratory Virus Identification"/>
</concept>
<concept>
<code value="90117"/>
<display value="ANAEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90101"/>
<display value="EPSTEIN-BARR VIRUS VCA-IgG AB"/>
</concept>
<concept>
<code value="90227"/>
<display value="Sonication culture, prosthetic joint"/>
</concept>
<concept>
<code value="90080"/>
<display value="TISSUE CULTURE-TISSUE"/>
</concept>
<concept>
<code value="90229"/>
<display value="Lyme IgM"/>
</concept>
<concept>
<code value="90211"/>
<display value="Rubella IgG/IgM Antibody"/>
</concept>
<concept>
<code value="90123"/>
<display value="HCV VIRAL LOAD"/>
</concept>
<concept>
<code value="90258"/>
<display value="AEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90143"/>
<display value="CMV IgG ANTIBODY"/>
</concept>
<concept>
<code value="90250"/>
<display value="OVA + PARASITES"/>
</concept>
<concept>
<code value="90239"/>
<display value="POST-MORTEM DIRECT ACID-FAST STAIN"/>
</concept>
<concept>
<code value="90098"/>
<display value="SWAB- R/O YEAST"/>
</concept>
<concept>
<code value="90178"/>
<display value="FUNGAL CULTURE (HAIR/SKIN/NAILS)"/>
</concept>
<concept>
<code value="90246"/>
<display value="ACID FAST SMEAR"/>
</concept>
<concept>
<code value="90142"/>
<display value="VIRAL CULTURE: R/O CYTOMEGALOVIRUS"/>
</concept>
<concept>
<code value="90253"/>
<display value="CLOSTRIDIUM DIFFICILE TOXIN ASSAY"/>
</concept>
<concept>
<code value="90208"/>
<display value="Myco-F Bottle Gram Stain"/>
</concept>
<concept>
<code value="90153"/>
<display value="Additional Cells and Karyotype"/>
</concept>
<concept>
<code value="90151"/>
<display value="Tissue Culture-Bone Marrow"/>
</concept>
<concept>
<code value="90204"/>
<display value="Anaerobic Bottle Gram Stain"/>
</concept>
<concept>
<code value="90111"/>
<display value="CHROMOSOME ANALYSIS-BONE MARROW"/>
</concept>
<concept>
<code value="90133"/>
<display value="MONOSPOT"/>
</concept>
<concept>
<code value="90188"/>
<display
value="NEISSERIA GONORRHOEAE (GC), NUCLEIC ACID PROBE, WITH AMPLIFICATION"/>
</concept>
<concept>
<code value="90177"/>
<display value="HBV Viral Load"/>
</concept>
<concept>
<code value="90156"/>
<display value="DIRECT INFLUENZA A ANTIGEN TEST"/>
</concept>
<concept>
<code value="90112"/>
<display value="MODIFIED ACID-FAST STAIN FOR NOCARDIA"/>
</concept>
<concept>
<code value="90213"/>
<display value="Enterovirus Culture"/>
</concept>
<concept>
<code value="90231"/>
<display value="Swab - R/O Yeast - IC"/>
</concept>
<concept>
<code value="90167"/>
<display value="ISOLATE FOR MIC"/>
</concept>
<concept>
<code value="90129"/>
<display value="ASO Screen"/>
</concept>
<concept>
<code value="90059"/>
<display value="LEGIONELLA CULTURE"/>
</concept>
<concept>
<code value="90228"/>
<display value="Lyme IgG"/>
</concept>
<concept>
<code value="90113"/>
<display value="URINE-GRAM STAIN - UNSPUN"/>
</concept>
<concept>
<code value="90240"/>
<display value="ACID FAST CULTURE"/>
</concept>
<concept>
<code value="90248"/>
<display value="RAPID PLASMA REAGIN TEST"/>
</concept>
<concept>
<code value="90126"/>
<display value="TOXOPLASMA IgM ANTIBODY"/>
</concept>
<concept>
<code value="90088"/>
<display value="CHROMOSOME ANALYSIS - ADDITIONAL KARYOTYPE"/>
</concept>
<concept>
<code value="90166"/>
<display value="Problem"/>
</concept>
<concept>
<code value="90187"/>
<display value="GENITAL CULTURE FOR TOXIC SHOCK"/>
</concept>
<concept>
<code value="90199"/>
<display
value="Immunofluorescent test for Pneumocystis jirovecii (carinii)"/>
</concept>
<concept>
<code value="90127"/>
<display value="RUBEOLA ANTIBODY, IgG"/>
</concept>
<concept>
<code value="90180"/>
<display value="O&P MACROSCOPIC EXAM - WORM"/>
</concept>
<concept>
<code value="90262"/>
<display value="CHLAMYDIA CULTURE"/>
</concept>
<concept>
<code value="90092"/>
<display value="AEROBIC BOTTLE"/>
</concept>
<concept>
<code value="90146"/>
<display value="CHROMOSOME ANALYSIS-NEOPLASTIC BLOOD"/>
</concept>
<concept>
<code value="90132"/>
<display value="LYME SEROLOGY"/>
</concept>
</CodeSystem>